Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_14285 | Not Available | Positive | 3024017 - 3025414 | 49347.7 |
| Putative tail-collar fiber protein | APR48_14290 | Not Available | Positive | 3025649 - 3026353 | 24393.5 |
| Attr | Not Available | Not Available | Positive | 3030470 - 3030482 | Not Available |
| Attl | Not Available | Not Available | Positive | 3732095 - 3732106 | Not Available |
| Hypothetical protein | APR48_17575 | Not Available | Positive | 3734682 - 3735419 | 27238.7 |
| hypothetical protein | APR48_17580 | Not Available | Positive | 3735412 - 3735981 | 20750.9 |
| Hnh endonuclease family protein | APR48_17585 | Not Available | Positive | 3735978 - 3736472 | 18757.8 |
| hypothetical protein | APR48_17590 | Not Available | Positive | 3736476 - 3736664 | 7303.72 |
| Putative recombination protein ninb | APR48_17595 | Not Available | Positive | 3736801 - 3737256 | 16970.4 |
| Ning protein | APR48_17600 | Not Available | Positive | 3737369 - 3737971 | 22657.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
