Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase | APR48_05090 | Not Available | Negative | 1085254 - 1086438 | 44438.9 |
| heat-shock protein hsp20 | APR48_05100 | Not Available | Positive | 1087197 - 1087622 | 15979.0 |
| cation/acetate symporter actp | APR48_05110 | Not Available | Negative | 1088654 - 1090390 | 60331.4 |
| hypothetical protein | APR48_05115 | Not Available | Negative | 1090387 - 1090707 | 11956.8 |
| amp-dependent synthetase | APR48_05120 | Not Available | Positive | 1090849 - 1092825 | 71389.9 |
| mbl fold metallo-hydrolase | APR48_05125 | Not Available | Negative | 1092836 - 1093729 | 32575.8 |
| arsr family transcriptional regulator | APR48_05130 | Not Available | Positive | 1093818 - 1094141 | 11830.6 |
| yeee/yede | APR48_05135 | Not Available | Positive | 1094141 - 1094575 | 14704.5 |
| hypothetical protein | APR48_05140 | Not Available | Positive | 1094585 - 1095001 | 14250.2 |
| hypothetical protein | APR48_05145 | Not Available | Negative | 1095169 - 1095675 | 18148.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
