Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain acyl-coa synthetase | APR48_04935 | Not Available | Negative | 1056554 - 1058023 | 51173.6 |
| hypothetical protein | APR48_04940 | Not Available | Negative | 1058020 - 1058670 | 23293.1 |
| iron permease | APR48_04945 | Not Available | Negative | 1058822 - 1059127 | 10781.8 |
| ntp pyrophosphohydrolase | APR48_04950 | Not Available | Negative | 1059379 - 1059870 | 18144.7 |
| trypsin | APR48_04955 | Not Available | Negative | 1059867 - 1061297 | 48967.5 |
| universal stress protein uspa | APR48_04960 | Not Available | Negative | 1061298 - 1061720 | 15183.4 |
| flavodoxin | APR48_04965 | Not Available | Positive | 1061923 - 1062456 | 18934.8 |
| peptidase | APR48_04970 | Not Available | Positive | 1062680 - 1063963 | 45502.5 |
| molecular chaperone dnak | APR48_04975 | Not Available | Positive | 1064021 - 1064395 | 13998.5 |
| hypothetical protein | APR48_04980 | Not Available | Negative | 1064411 - 1064878 | 17471.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
