Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twitching motility protein pilt | APR48_04880 | Not Available | Negative | 1047513 - 1047893 | 14131.3 |
| hypothetical protein | APR48_04885 | Not Available | Positive | 1048540 - 1049919 | 51036.0 |
| hypothetical protein | APR48_04890 | Not Available | Positive | 1049912 - 1050280 | 13604.4 |
| hypothetical protein | APR48_04895 | Not Available | Negative | 1050450 - 1050734 | 10199.2 |
| hypothetical protein | APR48_04900 | Not Available | Positive | 1051215 - 1051463 | 8857.54 |
| hypothetical protein | APR48_04905 | Not Available | Positive | 1051460 - 1052164 | 23901.6 |
| two-component system response regulator | APR48_04910 | Not Available | Positive | 1052231 - 1052905 | 24627.6 |
| histidine kinase | APR48_04915 | Not Available | Positive | 1052902 - 1054257 | 50218.8 |
| hypothetical protein | APR48_04920 | Not Available | Negative | 1054280 - 1054930 | 23763.7 |
| long-chain fatty acid--coa ligase | APR48_04930 | Not Available | Negative | 1055868 - 1056557 | 25179.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
