Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_04830 | Not Available | Negative | 1036046 - 1037059 | 35180.5 |
| 3-hydroxybutyryl-coa dehydratase | APR48_04835 | Not Available | Negative | 1037678 - 1038454 | 28147.0 |
| enoyl-coa hydratase | APR48_04840 | Not Available | Negative | 1038451 - 1039269 | 28860.7 |
| coa-transferase | APR48_04845 | Not Available | Negative | 1039266 - 1040459 | 43206.8 |
| abc transporter | APR48_04850 | Not Available | Negative | 1040483 - 1041541 | 37895.7 |
| abc transporter permease | APR48_04855 | Not Available | Negative | 1041572 - 1043302 | 61725.6 |
| abc transporter substrate-binding protein | APR48_04860 | Not Available | Negative | 1043286 - 1044329 | 37532.3 |
| quinone oxidoreductase | APR48_04865 | Not Available | Positive | 1044455 - 1045438 | 34497.4 |
| glutathione s-transferase | APR48_04870 | Not Available | Positive | 1045456 - 1046235 | 29065.9 |
| gntr family transcriptional regulator | APR48_04875 | Not Available | Positive | 1046285 - 1046968 | 25274.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
