Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | APR48_04725 | Not Available | Positive | 1018981 - 1019886 | 32896.0 |
| mbl fold metallo-hydrolase | APR48_04730 | Not Available | Positive | 1020008 - 1020892 | 31492.8 |
| protein-disulfide isomerase | APR48_04735 | Not Available | Positive | 1020880 - 1021593 | 24984.7 |
| antibiotic biosynthesis monooxygenase | APR48_04740 | Not Available | Negative | 1021597 - 1021896 | 11271.6 |
| feruloyl esterase | APR48_04745 | Not Available | Negative | 1022007 - 1023314 | 47188.8 |
| acetyl-coa acetyltransferase | APR48_04755 | Not Available | Negative | 1023658 - 1024848 | 41451.9 |
| aminoglycoside phosphotransferase | APR48_04760 | Not Available | Negative | 1024887 - 1025945 | 39799.6 |
| acyl-coa dehydrogenase | APR48_04765 | Not Available | Negative | 1025942 - 1027150 | 43025.7 |
| 2-deoxy-d-gluconate 3-dehydrogenase | APR48_04770 | Not Available | Negative | 1027164 - 1027910 | 26076.6 |
| glutathione s-transferase | APR48_04775 | Not Available | Negative | 1027914 - 1028549 | 23993.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
