Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phasin (pha-granule associated protein) | APR48_04675 | Not Available | Positive | 1005977 - 1006531 | 18912.2 |
| 3-hydroxy-2-methylbutyryl-coa dehydrogenase | APR48_04680 | Not Available | Positive | 1006687 - 1007445 | 25741.3 |
| ribonuclease r | APR48_04685 | Not Available | Negative | 1007393 - 1008340 | 34352.9 |
| dna primase | APR48_04690 | Not Available | Positive | 1008427 - 1010409 | 72787.3 |
| rna polymerase subunit sigma | APR48_04695 | Not Available | Positive | 1010719 - 1013091 | 87371.4 |
| multidrug transporter cfla | APR48_04700 | Not Available | Positive | 1013200 - 1014435 | 44576.3 |
| hypothetical protein | APR48_04705 | Not Available | Positive | 1014488 - 1015624 | 41071.1 |
| abc transporter substrate-binding protein | APR48_04710 | Not Available | Negative | 1015653 - 1016639 | 34061.5 |
| coa-transferase | APR48_04715 | Not Available | Negative | 1016682 - 1017884 | 43101.1 |
| 3-hydroxy-3-methylglutaryl-coa lyase | APR48_04720 | Not Available | Negative | 1017881 - 1018849 | 34053.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
