Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_04625 | Not Available | Negative | 995841 - 996296 | 16522.7 |
| disulfide bond formation protein dsba | APR48_04630 | Not Available | Negative | 996393 - 997931 | 52564.1 |
| mfs transporter | APR48_04635 | Not Available | Negative | 998060 - 999238 | 41010.5 |
| recombinase rmuc | APR48_04640 | Not Available | Negative | 999235 - 1000596 | 49944.9 |
| d-glycerate dehydrogenase | APR48_04645 | Not Available | Negative | 1000639 - 1001637 | 35235.5 |
| sodium:proton antiporter | APR48_04650 | Not Available | Negative | 1001650 - 1003059 | 49917.0 |
| nicotinate phosphoribosyltransferase | APR48_04655 | Not Available | Negative | 1003112 - 1004332 | 46617.3 |
| general stress protein csbd | APR48_04660 | Not Available | Positive | 1004525 - 1004758 | 9162.65 |
| hypothetical protein | APR48_04665 | Not Available | Positive | 1004809 - 1005216 | 14823.7 |
| thioesterase | APR48_04670 | Not Available | Negative | 1005275 - 1005730 | 16682.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
