Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail sheath protein | APR48_14235 | Not Available | Positive | 3013687 - 3015159 | 52002.2 |
| Tail tube protein | APR48_14240 | Not Available | Positive | 3015178 - 3015528 | 12231.3 |
| hypothetical protein | APR48_14245 | Not Available | Positive | 3015618 - 3015941 | 11151.2 |
| Bacteriophage tail length determination protein | APR48_14250 | Not Available | Positive | 3016060 - 3018150 | 73540.9 |
| Tail/dna circulation protein | APR48_14255 | Not Available | Positive | 3018150 - 3019391 | 44269.0 |
| Baseplate assembly protein | APR48_14260 | Not Available | Positive | 3019388 - 3020539 | 42428.4 |
| Putative baseplate assembly protein | APR48_14265 | Not Available | Positive | 3020539 - 3021213 | 24247.9 |
| Tail protein | APR48_14270 | Not Available | Positive | 3021271 - 3021675 | 15094.9 |
| Base plate j protein | APR48_14275 | Not Available | Positive | 3021749 - 3022801 | 36593.5 |
| Tail protein | APR48_14280 | Not Available | Positive | 3022789 - 3023457 | 24564.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
