Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esterase | APR52_04340 | Not Available | Negative | 947540 - 948991 | 54215.6 |
| aromatic amino acid aminotransferase | APR52_04345 | Not Available | Negative | 949158 - 950354 | 42586.3 |
| excinuclease abc subunit b | APR52_04350 | Not Available | Positive | 950460 - 952580 | 79696.4 |
| dna-binding protein | APR52_04355 | Not Available | Positive | 952820 - 953356 | 19389.6 |
| cysteine desulfurase iscs | APR52_04360 | Not Available | Positive | 953465 - 954685 | 44941.0 |
| scaffolding protein | APR52_04365 | Not Available | Positive | 954727 - 955140 | 14306.0 |
| iron-sulfur cluster assembly protein | APR52_04370 | Not Available | Positive | 955142 - 955465 | 11810.1 |
| co-chaperone hscb | APR52_04375 | Not Available | Positive | 955529 - 956047 | 19502.8 |
| molecular chaperone hsca | APR52_04380 | Not Available | Positive | 956054 - 957913 | 65113.3 |
| 2fe-2s ferredoxin | APR52_04385 | Not Available | Positive | 957952 - 958290 | 12191.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
