Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family acetyltransferase | APR52_04290 | Not Available | Positive | 937903 - 938376 | 17854.6 |
| transporter | APR52_04295 | Not Available | Positive | 938370 - 939422 | 37201.8 |
| methylmalonyl-coa carboxyltransferase | APR52_04300 | Not Available | Positive | 939463 - 941007 | 56466.2 |
| acetyl/propionyl-coa carboxylase subuit alpha | APR52_04305 | Not Available | Positive | 941143 - 943191 | 74186.1 |
| biotin synthase | APR52_04310 | Not Available | Positive | 943206 - 944222 | 36462.9 |
| lactoylglutathione lyase | APR52_04315 | Not Available | Positive | 944219 - 944707 | 17626.4 |
| arsr family transcriptional regulator | APR52_04320 | Not Available | Negative | 944719 - 945216 | 18247.2 |
| permease | APR52_04325 | Not Available | Positive | 945334 - 946239 | 31541.7 |
| lysine transporter lyse | APR52_04330 | Not Available | Negative | 946253 - 946891 | 22265.9 |
| ferredoxin | APR52_04335 | Not Available | Negative | 946888 - 947520 | 22266.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
