Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-aminohexanoate hydrolase | APR52_04240 | Not Available | Positive | 928183 - 929418 | 43916.0 |
| hypothetical protein | APR52_04245 | Not Available | Negative | 929419 - 929799 | 14310.9 |
| hypothetical protein | APR52_04250 | Not Available | Negative | 929848 - 930312 | 17007.5 |
| doxx family protein | APR52_04255 | Not Available | Negative | 930372 - 930785 | 14561.2 |
| trna-dihydrouridine synthase a | APR52_04260 | Not Available | Positive | 931082 - 932047 | 36370.8 |
| 2,4-dichlorophenoxyacetate dioxygenase | APR52_04265 | Not Available | Negative | 932071 - 932949 | 33249.5 |
| mfs transporter | APR52_04270 | Not Available | Negative | 932978 - 933916 | 32829.1 |
| iclr family transcriptional regulator | APR52_04275 | Not Available | Positive | 934106 - 934891 | 27993.8 |
| gntr family transcriptional regulator | APR52_04280 | Not Available | Negative | 934932 - 935573 | 23900.7 |
| methylmalonyl-coa mutase | APR52_04285 | Not Available | Positive | 935732 - 937894 | 77846.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
