Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_04190 | Not Available | Negative | 916063 - 917787 | 62402.6 |
| hypothetical protein | APR52_04195 | Not Available | Negative | 917802 - 918452 | 23979.7 |
| acetyl esterase | APR52_04200 | Not Available | Negative | 918461 - 919372 | 33277.9 |
| peptide abc transporter atp-binding protein | APR52_04205 | Not Available | Negative | 919444 - 921111 | 60861.4 |
| peptide abc transporter permease | APR52_04210 | Not Available | Negative | 921108 - 921920 | 28763.0 |
| peptide abc transporter | APR52_04215 | Not Available | Negative | 921920 - 922864 | 34356.5 |
| peptide abc transporter substrate-binding protein | APR52_04220 | Not Available | Negative | 922881 - 924431 | 56034.0 |
| hypothetical protein | APR52_04225 | Not Available | Negative | 924538 - 925629 | 39389.9 |
| omega amino acid--pyruvate aminotransferase | APR52_04230 | Not Available | Negative | 925650 - 926951 | 45841.0 |
| hypothetical protein | APR52_04235 | Not Available | Positive | 927202 - 928143 | 35933.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
