Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | APR52_03990 | Not Available | Positive | 871865 - 872257 | 14520.6 |
| integrase | APR52_03995 | Not Available | Positive | 872254 - 873147 | 33321.7 |
| hypothetical protein | APR52_04000 | Not Available | Positive | 873631 - 874140 | 19498.0 |
| transposase | APR52_04005 | Not Available | Positive | 874792 - 875184 | 14520.6 |
| integrase | APR52_04010 | Not Available | Positive | 875181 - 876074 | 33321.7 |
| hypothetical protein | APR52_04015 | Not Available | Positive | 876322 - 876516 | 6807.32 |
| transposase | APR52_04020 | P16942 | Negative | 878778 - 879542 | 29150.8 |
| transposase | APR52_04025 | Q51647 | Negative | 879686 - 880009 | 12314.8 |
| hypothetical protein | APR52_04030 | Not Available | Positive | 880084 - 880266 | 6412.55 |
| hypothetical protein | APR52_04035 | Not Available | Positive | 880270 - 881154 | 31754.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
