Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_03890 | Not Available | Negative | 845221 - 846411 | 41582.0 |
| acyl-coa dehydrogenase | APR52_03895 | Q50LG2 | Negative | 846408 - 847556 | 41263.6 |
| 3-methylcrotonyl-coa carboxylase | APR52_03900 | Q2QMG2 | Negative | 847594 - 849564 | 69721.2 |
| acetyl-coa carboxylase carboxyltransferase subunit | APR52_03905 | O86318 | Negative | 849576 - 851195 | 58347.5 |
| 3-hydroxyacyl-coa dehydrogenase | APR52_03910 | A1S7L6 | Negative | 851251 - 853386 | 74911.9 |
| acetyl-coa acetyltransferase | APR52_03915 | Not Available | Negative | 853412 - 854620 | 42098.6 |
| acyl-coa dehydrogenase | APR52_03920 | P79274 | Negative | 854684 - 855820 | 41813.2 |
| hypothetical protein | APR52_03925 | Not Available | Positive | 855902 - 856573 | 25620.0 |
| hypothetical protein | APR52_03930 | Not Available | Positive | 856570 - 857319 | 26583.6 |
| electron transfer flavoprotein subunit beta | APR52_03935 | Not Available | Positive | 857322 - 858263 | 31650.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
