Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ning protein | APR52_20805 | Not Available | Negative | 4480753 - 4481355 | 22657.3 |
| Putative recombination protein ninb | APR52_20810 | Not Available | Negative | 4481468 - 4481923 | 16970.4 |
| Attr | Not Available | Not Available | Positive | 4481681 - 4481692 | Not Available |
| hypothetical protein | APR52_20815 | Not Available | Negative | 4482060 - 4482248 | 7303.72 |
| Hnh endonuclease family protein | APR52_20820 | Not Available | Negative | 4482252 - 4482746 | 18757.8 |
| hypothetical protein | APR52_20825 | Not Available | Negative | 4482743 - 4483312 | 20750.9 |
| Hypothetical protein | APR52_20830 | Not Available | Negative | 4483305 - 4484042 | 27238.7 |
| hypothetical protein | APR52_20835 | Not Available | Negative | 4484039 - 4484353 | 11602.9 |
| hypothetical protein | APR52_20840 | Not Available | Negative | 4484353 - 4484580 | 8405.04 |
| hypothetical protein | APR52_20845 | Not Available | Negative | 4484785 - 4485135 | 12944.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
