Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | APR52_03840 | Not Available | Positive | 834262 - 835497 | 44749.1 |
| taurine dioxygenase | APR52_03845 | Q88RA3 | Positive | 835532 - 836374 | 31385.6 |
| hypothetical protein | APR52_03850 | Not Available | Negative | 836397 - 837203 | 29023.6 |
| hypothetical protein | APR52_03855 | Not Available | Negative | 837200 - 837622 | 14896.1 |
| acyl-coa dehydrogenase | APR52_03860 | Not Available | Negative | 837623 - 838819 | 43138.9 |
| terpene utilization protein atua | APR52_03865 | Not Available | Negative | 838859 - 840640 | 62215.3 |
| hypothetical protein | APR52_03870 | Not Available | Negative | 840690 - 841181 | 17381.8 |
| mbl fold metallo-hydrolase | APR52_03875 | Q5B0C9 | Negative | 841216 - 842865 | 59528.1 |
| hypothetical protein | APR52_03880 | Not Available | Negative | 842879 - 844285 | 52813.8 |
| atpase | APR52_03885 | Not Available | Negative | 844269 - 845228 | 35885.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
