Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | APR52_03790 | P95280 | Negative | 822813 - 823964 | 42177.4 |
| acyl-coa dehydrogenase | APR52_03795 | A0R502 | Negative | 823976 - 825184 | 42189.3 |
| acyl-coa dehydrogenase | APR52_03800 | Not Available | Negative | 825203 - 826369 | 42878.8 |
| 2,4-dienoyl-coa reductase | APR52_03805 | P42593 | Negative | 826388 - 828472 | 73871.6 |
| transglutaminase | APR52_03810 | Not Available | Positive | 828644 - 829336 | 25292.0 |
| alpha/beta hydrolase | APR52_03815 | I6XU97 | Positive | 829395 - 830243 | 29706.2 |
| amp-dependent synthetase | APR52_03820 | Q5P603 | Positive | 830240 - 831745 | 52191.3 |
| hypothetical protein | APR52_03825 | Not Available | Negative | 831779 - 832600 | 28061.6 |
| thiolase | APR52_03830 | Not Available | Positive | 832657 - 833829 | 40578.0 |
| hypothetical protein | APR52_03835 | D1AB77 | Positive | 833846 - 834247 | 14878.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
