Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | APR52_44100 | Not Available | Positive | 9600171 - 9601376 | 43057.2 |
| transposase | APR52_44105 | Not Available | Negative | 9601512 - 9602723 | 44378.6 |
| electron transporter rnfb | APR52_44110 | Q9HZP6 | Positive | 9603092 - 9603799 | 25220.8 |
| electron transfer flavoprotein subunit beta | APR52_44115 | Not Available | Positive | 9603814 - 9604631 | 27357.3 |
| amp-dependent synthetase | APR52_44120 | P31638 | Positive | 9604632 - 9606159 | 55376.8 |
| transglycosylase | APR52_44125 | Not Available | Positive | 9606160 - 9607229 | 39281.7 |
| hypothetical protein | APR52_44130 | Not Available | Positive | 9607455 - 9607680 | 7488.83 |
| transposase | APR52_44145 | Not Available | Positive | 9610616 - 9611005 | 14545.5 |
| transposase | APR52_44150 | P0CF53 | Positive | 9611002 - 9611847 | 32165.4 |
| elongation factor tu | APR52_44155 | P42481 | Negative | 9611881 - 9612975 | 39648.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
