Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | APR52_44005 | Not Available | Positive | 9578881 - 9580227 | 48350.8 |
| hypothetical protein | APR52_44020 | Not Available | Negative | 9582859 - 9583230 | 12696.1 |
| atp-binding protein | APR52_44035 | P15026 | Positive | 9586437 - 9587240 | 29516.5 |
| transposase | APR52_44040 | Not Available | Positive | 9587632 - 9587982 | 13514.3 |
| diacylglycerol kinase | APR52_44055 | Not Available | Positive | 9591087 - 9592076 | 35188.5 |
| dna repair exonuclease | APR52_44060 | Not Available | Positive | 9592073 - 9592891 | 29604.6 |
| integrase | APR52_44070 | P55646 | Positive | 9594848 - 9596356 | 56353.0 |
| abc transporter permease | APR52_44075 | Not Available | Negative | 9596475 - 9597262 | 27667.9 |
| abc transporter permease | APR52_44080 | Not Available | Negative | 9597279 - 9598154 | 31097.6 |
| hypothetical protein | APR52_44090 | Not Available | Positive | 9598689 - 9599666 | 35335.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
