Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetic acid degradation protein | APR52_03690 | Not Available | Negative | 800991 - 801431 | 15681.0 |
| hypothetical protein | APR52_03695 | Not Available | Negative | 801428 - 802630 | 42850.0 |
| hypothetical protein | APR52_03700 | P04816 | Negative | 802677 - 803879 | 42785.0 |
| branched-chain amino acid abc transporter permease | APR52_03705 | Not Available | Negative | 803932 - 804969 | 36352.5 |
| abc transporter permease | APR52_03710 | Not Available | Negative | 804969 - 805841 | 30582.1 |
| amp-dependent synthetase | APR52_03715 | Not Available | Negative | 805841 - 807721 | 70265.9 |
| abc transporter atp-binding protein | APR52_03720 | Not Available | Negative | 807718 - 808497 | 28556.7 |
| abc transporter atp-binding protein | APR52_03725 | Not Available | Negative | 808505 - 809296 | 28900.2 |
| 2-ketocyclohexanecarboxyl-coa hydrolase | APR52_03730 | Not Available | Negative | 809318 - 810103 | 28331.0 |
| short-chain dehydrogenase | APR52_03735 | Not Available | Negative | 810118 - 810912 | 27858.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
