Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_43865 | Not Available | Positive | 9548917 - 9549162 | 8824.04 |
| hypothetical protein | APR52_43870 | Not Available | Positive | 9549179 - 9549514 | 12255.8 |
| hypothetical protein | APR52_43875 | Not Available | Positive | 9549526 - 9550677 | 42343.2 |
| abc transporter atp-binding protein | APR52_43885 | Not Available | Positive | 9551125 - 9551832 | 25527.4 |
| abc transporter permease | APR52_43890 | Not Available | Positive | 9551909 - 9553105 | 42733.0 |
| abc transporter permease | APR52_43895 | Not Available | Positive | 9553162 - 9554358 | 42802.3 |
| deacetylase | APR52_43910 | Q9HXM1 | Positive | 9558396 - 9559349 | 35213.8 |
| mechanosensitive ion channel protein | APR52_43915 | P39285 | Positive | 9559425 - 9560705 | 46273.1 |
| abc transporter permease | APR52_43920 | Q8VQK4 | Positive | 9560960 - 9561811 | 30479.1 |
| peptide abc transporter permease | APR52_43925 | Q6D3B2 | Positive | 9561808 - 9562689 | 30923.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
