Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_43755 | Not Available | Positive | 9526228 - 9526512 | 10563.3 |
| hypothetical protein | APR52_43760 | Not Available | Positive | 9526509 - 9527252 | 27555.6 |
| universal stress protein uspa | APR52_43765 | Q57951 | Positive | 9527449 - 9527889 | 15000.2 |
| pseudouridine synthase | APR52_43770 | Q8FL93 | Negative | 9527935 - 9528624 | 25200.5 |
| mfs transporter | APR52_43775 | Not Available | Positive | 9528838 - 9530031 | 41638.7 |
| (2fe-2s)-binding protein | APR52_43780 | Not Available | Negative | 9530033 - 9530323 | 10236.2 |
| hypothetical protein | APR52_43785 | Q5E7H1 | Negative | 9530320 - 9530584 | 9899.94 |
| hypothetical protein | APR52_43790 | Q9L9F0 | Positive | 9530639 - 9531460 | 29812.3 |
| abc transporter substrate-binding protein | APR52_43795 | Not Available | Positive | 9531486 - 9532487 | 35639.7 |
| sulfonate abc transporter substrate-binding protein | APR52_43800 | Not Available | Positive | 9532513 - 9533481 | 33737.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
