Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_43640 | Not Available | Negative | 9502206 - 9502892 | 25373.2 |
| hypothetical protein | APR52_43645 | Not Available | Positive | 9502987 - 9503580 | 21306.2 |
| hypothetical protein | APR52_43650 | Not Available | Positive | 9503580 - 9503786 | 7379.03 |
| hypothetical protein | APR52_43655 | Not Available | Positive | 9504144 - 9504566 | 15438.5 |
| abc transporter permease | APR52_43660 | Not Available | Negative | 9504796 - 9506001 | 43294.5 |
| hydroxyacid dehydrogenase | APR52_43665 | P0A9V8 | Negative | 9506110 - 9507024 | 31945.6 |
| aldehyde dehydrogenase | APR52_43670 | Not Available | Negative | 9507050 - 9508480 | 50703.5 |
| lysr family transcriptional regulator | APR52_43675 | Not Available | Positive | 9508621 - 9509574 | 34036.5 |
| hypothetical protein | APR52_43690 | Not Available | Positive | 9510631 - 9512079 | 51105.8 |
| short-chain dehydrogenase | APR52_43695 | Q8RJB2 | Positive | 9512140 - 9512904 | 26832.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
