Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_43580 | Not Available | Positive | 9485850 - 9486167 | 11923.5 |
| transposase | APR52_43590 | P16939 | Positive | 9490289 - 9490582 | 11223.6 |
| transposase | APR52_43595 | P0CF79 | Positive | 9490579 - 9491436 | 33012.3 |
| alkanesulfonate monooxygenase | APR52_43605 | B2UAU3 | Negative | 9492644 - 9493765 | 41125.2 |
| acyl-coa dehydrogenase | APR52_43610 | P96608 | Positive | 9493907 - 9495142 | 43273.5 |
| nitrate abc transporter substrate-binding protein | APR52_43615 | Not Available | Positive | 9495139 - 9496119 | 34703.5 |
| cysteine dioxygenase | APR52_43620 | Q9I0N5 | Positive | 9496116 - 9496748 | 22798.8 |
| sulfurtransferase | APR52_43625 | Not Available | Positive | 9496745 - 9498394 | 59400.5 |
| atp-binding protein | APR52_43630 | Not Available | Negative | 9498773 - 9499576 | 29472.4 |
| transposase | APR52_43635 | Not Available | Negative | 9499566 - 9501155 | 59649.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
