Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_43510 | Not Available | Negative | 9468293 - 9468817 | 19489.6 |
| hypothetical protein | APR52_43515 | Not Available | Positive | 9469071 - 9469304 | 9350.15 |
| hypothetical protein | APR52_43520 | Not Available | Negative | 9469332 - 9470045 | 26743.2 |
| hypothetical protein | APR52_43525 | Not Available | Negative | 9470189 - 9471184 | 36680.8 |
| type vi secretion protein | APR52_43545 | Q9I755 | Negative | 9472389 - 9475991 | 133006.0 |
| hypothetical protein | APR52_43550 | Not Available | Negative | 9475988 - 9477355 | 48766.4 |
| type vi secretion protein | APR52_43555 | Q9I753 | Negative | 9477380 - 9478711 | 49277.5 |
| hypothetical protein | APR52_43565 | Not Available | Positive | 9480139 - 9480387 | 8670.59 |
| transposase | APR52_43570 | Not Available | Negative | 9482317 - 9483855 | 58498.0 |
| hypothetical protein | APR52_43575 | Not Available | Positive | 9485591 - 9485827 | 8700.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
