Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_43405 | O26018 | Positive | 9444702 - 9445130 | 16285.7 |
| teicoplanin resistance protein vanz | APR52_43410 | Not Available | Positive | 9445136 - 9446254 | 40278.6 |
| 2fe-2s ferredoxin | APR52_43415 | P07324 | Positive | 9446298 - 9446654 | 12923.3 |
| alpha/beta hydrolase | APR52_43420 | Q9ZD73 | Positive | 9446743 - 9447381 | 22244.7 |
| cytochrome c | APR52_43425 | P08506 | Positive | 9447427 - 9448596 | 42083.3 |
| 30s ribosomal protein s12 | APR52_43430 | C5CP60 | Positive | 9448817 - 9449194 | 13976.1 |
| 30s ribosomal protein s7 | APR52_43435 | C5CP59 | Positive | 9449350 - 9449823 | 18023.2 |
| elongation factor g | APR52_43440 | C5CP58 | Positive | 9449919 - 9452018 | 77248.8 |
| hypothetical protein | APR52_43445 | Not Available | Negative | 9452420 - 9454096 | 62911.8 |
| hypothetical protein | APR52_43455 | Q9HYV6 | Negative | 9459115 - 9459642 | 18803.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
