Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_03640 | Not Available | Positive | 790076 - 791278 | 41548.4 |
| acyl-coa dehydrogenase | APR52_03645 | Not Available | Positive | 791310 - 792470 | 42622.0 |
| enoyl-coa hydratase | APR52_03650 | Q3TLP5 | Positive | 792480 - 793283 | 28817.5 |
| carbamoyl-phosphate synthase subunit l | APR52_03655 | Not Available | Positive | 793283 - 795313 | 71296.1 |
| hypothetical protein | APR52_03660 | Not Available | Positive | 795334 - 796125 | 28418.2 |
| enoyl-coa hydratase | APR52_03665 | Q9KJE7 | Positive | 796134 - 796922 | 28867.0 |
| carbonate dehydratase | APR52_03670 | P61517 | Positive | 796951 - 797601 | 23902.7 |
| amp-dependent synthetase | APR52_03675 | A4WJG1 | Negative | 797635 - 799611 | 71956.4 |
| nitroreductase | APR52_03680 | Q6DLR9 | Positive | 799728 - 800411 | 25509.4 |
| flavodoxin | APR52_03685 | Not Available | Positive | 800459 - 800950 | 17257.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
