Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | APR52_43215 | Not Available | Positive | 9397374 - 9398093 | 25562.3 |
| abc transporter permease | APR52_43220 | Not Available | Positive | 9398086 - 9398946 | 29991.5 |
| phosphonate monoester hydrolase | APR52_43225 | Q1M964 | Positive | 9398954 - 9400546 | 59337.7 |
| hypothetical protein | APR52_43230 | Not Available | Positive | 9400631 - 9401587 | 33347.9 |
| abc transporter permease | APR52_43235 | Not Available | Positive | 9401600 - 9402604 | 35500.8 |
| receptor | APR52_43240 | Not Available | Positive | 9402683 - 9403690 | 34790.6 |
| arac family transcriptional regulator | APR52_43245 | Not Available | Positive | 9403738 - 9404625 | 31405.0 |
| oxidoreductase | APR52_43250 | Q99L04 | Positive | 9404672 - 9405604 | 33539.6 |
| iclr family transcriptional regulator | APR52_43255 | Q52154 | Negative | 9405620 - 9406393 | 27630.7 |
| sulfatase | APR52_43260 | O24867 | Positive | 9406394 - 9408055 | 60970.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
