Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+-exchanging protein | APR52_43165 | P72973 | Positive | 9386418 - 9387668 | 42807.0 |
| hypothetical protein | APR52_43170 | Not Available | Negative | 9387665 - 9388453 | 29133.1 |
| lipase | APR52_43175 | Not Available | Negative | 9388603 - 9389559 | 33101.8 |
| histidine kinase | APR52_43180 | P0DMK6 | Negative | 9389778 - 9391118 | 48204.0 |
| two-component system response regulator | APR52_43185 | I1WSZ4 | Negative | 9391151 - 9391828 | 25587.2 |
| hypothetical protein | APR52_43190 | Not Available | Positive | 9391991 - 9392368 | 13503.8 |
| cobalt-zinc-cadmium resistance protein | APR52_43195 | P13509 | Positive | 9392473 - 9393816 | 47614.5 |
| betaine-aldehyde dehydrogenase | APR52_43200 | Not Available | Positive | 9393890 - 9395353 | 52826.4 |
| abc transporter substrate-binding protein | APR52_43205 | Not Available | Positive | 9395399 - 9396652 | 44328.9 |
| abc transporter atp-binding protein | APR52_43210 | P33982 | Positive | 9396658 - 9397377 | 25843.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
