Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | APR52_43110 | P14176 | Negative | 9373683 - 9374864 | 41338.5 |
| glycine/betaine abc transporter atp-binding protein | APR52_43115 | P17328 | Negative | 9374890 - 9376152 | 44985.4 |
| fumarate hydratase | APR52_43120 | Q8XQE8 | Positive | 9376670 - 9378067 | 49622.1 |
| 3-beta hydroxysteroid dehydrogenase | APR52_43125 | Not Available | Negative | 9378131 - 9378748 | 21881.1 |
| lysr family transcriptional regulator | APR52_43130 | P76250 | Positive | 9378862 - 9379779 | 33326.3 |
| hypothetical protein | APR52_43135 | P57929 | Negative | 9379783 - 9380409 | 22930.5 |
| 4-deoxy-4-formamido-l-arabinose-phospho-udp deformylase | APR52_43145 | P30336 | Positive | 9381185 - 9383521 | 80761.8 |
| carboxymuconolactone decarboxylase | APR52_43150 | Not Available | Negative | 9383523 - 9384101 | 21469.9 |
| hxlr family transcriptional regulator | APR52_43155 | Not Available | Positive | 9384197 - 9384514 | 11838.3 |
| histidine kinase | APR52_43160 | Not Available | Positive | 9384561 - 9386408 | 66957.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
