Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_43060 | Not Available | Negative | 9364668 - 9365228 | 20390.2 |
| nitronate monooxygenase | APR52_43065 | Q9I4V0 | Negative | 9366168 - 9367139 | 34681.0 |
| hypothetical protein | APR52_43070 | Q9HZP7 | Negative | 9367154 - 9367360 | 7069.7 |
| fumarate hydratase | APR52_43075 | Q58690 | Negative | 9367368 - 9368570 | 43101.9 |
| hypothetical protein | APR52_43080 | Not Available | Negative | 9368644 - 9369324 | 25106.4 |
| hypothetical protein | APR52_43085 | Not Available | Positive | 9369429 - 9370406 | 33714.7 |
| cyclase | APR52_43090 | Not Available | Positive | 9370420 - 9371187 | 27948.1 |
| hypothetical protein | APR52_43095 | Q2UAZ9 | Positive | 9371208 - 9371681 | 17296.4 |
| 3-keto-5-aminohexanoate cleavage protein | APR52_43100 | Not Available | Positive | 9371678 - 9372613 | 34037.0 |
| glycine/betaine abc transporter substrate-binding protein | APR52_43105 | E0SCY3 | Negative | 9372635 - 9373660 | 37303.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
