Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | APR52_43010 | Not Available | Negative | 9353163 - 9353795 | 23949.6 |
| hxlr family transcriptional regulator | APR52_43015 | O31679 | Positive | 9353937 - 9354260 | 11976.8 |
| nucleoside hydrolase | APR52_43020 | Q9P6J4 | Negative | 9354291 - 9355268 | 34823.9 |
| dienelactone hydrolase | APR52_43025 | Not Available | Negative | 9355328 - 9356158 | 29673.6 |
| arac family transcriptional regulator | APR52_43030 | Not Available | Positive | 9356264 - 9357229 | 34214.6 |
| c4-dicarboxylate abc transporter | APR52_43035 | Not Available | Negative | 9357258 - 9358295 | 37500.7 |
| c4-dicarboxylate abc transporter | APR52_43040 | Not Available | Negative | 9358345 - 9359643 | 45617.1 |
| c4-dicarboxylate abc transporter | APR52_43045 | Not Available | Negative | 9359640 - 9360209 | 20929.4 |
| hypothetical protein | APR52_43050 | Not Available | Positive | 9360576 - 9360953 | 13650.5 |
| hypothetical protein | APR52_43055 | Not Available | Positive | 9361115 - 9361378 | 9990.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
