Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fis family transcriptional regulator | APR52_42900 | Q9HU19 | Positive | 9324303 - 9325658 | 50162.1 |
| hypothetical protein | APR52_42905 | Not Available | Positive | 9325855 - 9326538 | 25163.1 |
| cytochrome c | APR52_42910 | Not Available | Negative | 9326618 - 9327493 | 31077.4 |
| cytochrome c | APR52_42915 | Not Available | Positive | 9327688 - 9328014 | 11408.8 |
| cytochrome c oxidase subunit ii | APR52_42920 | Q04441 | Positive | 9328011 - 9328979 | 35161.4 |
| cytochrome b | APR52_42925 | Q04440 | Positive | 9328988 - 9331513 | 91642.0 |
| copg family transcriptional regulator | APR52_42930 | Not Available | Positive | 9331683 - 9331961 | 10234.0 |
| plasmid stabilization protein | APR52_42935 | Not Available | Positive | 9331961 - 9332236 | 10541.7 |
| hypothetical protein | APR52_42940 | Q4LAJ8 | Negative | 9332787 - 9333875 | 39783.7 |
| Trna-thr | Not Available | Not Available | Positive | 9336520 - 9336595 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
