Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | APR52_42845 | Q7WCX5 | Negative | 9311520 - 9312305 | 28947.9 |
| bola family transcriptional regulator | APR52_42850 | Not Available | Negative | 9312441 - 9312725 | 9913.97 |
| septation protein a | APR52_42855 | C5CNT0 | Negative | 9312728 - 9313273 | 20487.9 |
| peptide methionine sulfoxide reductase | APR52_42860 | C5CNS9 | Negative | 9313316 - 9313729 | 14952.5 |
| hypothetical protein | APR52_42865 | C5CNS8 | Negative | 9313726 - 9315249 | 55845.0 |
| arac family transcriptional regulator | APR52_42870 | Not Available | Negative | 9315294 - 9316349 | 39378.4 |
| hypothetical protein | APR52_42880 | Not Available | Negative | 9317422 - 9318273 | 29455.0 |
| hypothetical protein | APR52_42885 | Not Available | Positive | 9318808 - 9321093 | 80551.8 |
| hypothetical protein | APR52_42890 | Not Available | Positive | 9321180 - 9322172 | 35002.5 |
| hypothetical protein | APR52_42895 | P13633 | Positive | 9322301 - 9324310 | 73591.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
