Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain fatty acid--coa ligase | APR52_42790 | P69452 | Positive | 9294802 - 9296499 | 61659.6 |
| mbl fold metallo-hydrolase | APR52_42795 | Not Available | Positive | 9296500 - 9297429 | 33675.6 |
| hypothetical protein | APR52_42805 | Not Available | Negative | 9298013 - 9298486 | 17233.3 |
| hypothetical protein | APR52_42810 | P38097 | Negative | 9298814 - 9300838 | 72153.4 |
| diguanylate cyclase | APR52_42815 | P76245 | Negative | 9300843 - 9301862 | 36104.9 |
| protein-pii uridylyltransferase | APR52_42820 | Q8XZJ3 | Negative | 9301978 - 9304584 | 98002.7 |
| methionine aminopeptidase | APR52_42825 | Not Available | Negative | 9304616 - 9305440 | 29930.0 |
| phosphoribosylformylglycinamidine synthase | APR52_42830 | Q8XYN6 | Positive | 9305626 - 9309666 | 143803.0 |
| hypothetical protein | APR52_42835 | P0AFW6 | Positive | 9310017 - 9310454 | 15609.6 |
| hypothetical protein | APR52_42840 | Not Available | Negative | 9310465 - 9311415 | 34743.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
