Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiolase | APR52_03590 | Not Available | Negative | 779269 - 780525 | 43229.7 |
| enoyl-coa hydratase | APR52_03595 | Not Available | Negative | 780538 - 781338 | 28264.2 |
| hypothetical protein | APR52_03600 | Not Available | Positive | 781514 - 783031 | 54348.7 |
| lipid-transfer protein | APR52_03605 | O62742 | Positive | 783096 - 784280 | 41901.3 |
| acyl dehydratase | APR52_03610 | Not Available | Positive | 784307 - 784750 | 16220.6 |
| dehydratase | APR52_03615 | Not Available | Positive | 784771 - 785187 | 15058.3 |
| 3-oxoacyl-acp reductase | APR52_03620 | Not Available | Positive | 785227 - 786054 | 28470.3 |
| pimeloyl-coa dehydrogenase large subunit | APR52_03625 | Not Available | Positive | 786121 - 787302 | 43201.6 |
| hypothetical protein | APR52_03630 | Not Available | Positive | 787318 - 788475 | 40715.9 |
| methylcrotonoyl-coa carboxylase | APR52_03635 | Q3ULD5 | Positive | 788472 - 790079 | 58267.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
