Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoadipyl coa thiolase | APR52_42690 | Not Available | Negative | 9275185 - 9276390 | 41654.3 |
| 3-oxoadipate coa-transferase | APR52_42695 | P0A101 | Negative | 9276523 - 9277170 | 22700.5 |
| 3-oxoadipate coa-transferase | APR52_42700 | Q01103 | Negative | 9277167 - 9277868 | 24624.8 |
| pa-phosphatase | APR52_42705 | Not Available | Positive | 9278034 - 9278831 | 28288.0 |
| l-asparaginase | APR52_42710 | O68897 | Negative | 9278911 - 9279981 | 37636.2 |
| tetr family transcriptional regulator | APR52_42715 | Not Available | Positive | 9280188 - 9280823 | 23627.7 |
| nad(p)h dehydrogenase | APR52_42720 | P15559 | Positive | 9280950 - 9281537 | 22394.4 |
| amidohydrolase | APR52_42725 | Not Available | Positive | 9281534 - 9282826 | 46614.9 |
| creatinine amidohydrolase | APR52_42730 | P83772 | Positive | 9282866 - 9283729 | 31301.5 |
| abc transporter substrate-binding protein | APR52_42735 | Not Available | Positive | 9283795 - 9284775 | 35472.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
