Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_42640 | Not Available | Negative | 9261686 - 9262924 | 44896.3 |
| acylaldehyde oxidase | APR52_42645 | Not Available | Positive | 9263513 - 9265804 | 80442.5 |
| isoquinoline 1-oxidoreductase | APR52_42650 | Q51697 | Positive | 9265837 - 9266298 | 16235.6 |
| arac family transcriptional regulator | APR52_42655 | Not Available | Positive | 9266337 - 9267320 | 35949.2 |
| hypothetical protein | APR52_42660 | Not Available | Positive | 9267333 - 9268061 | 26096.2 |
| hypothetical protein | APR52_42665 | Not Available | Negative | 9268084 - 9268311 | 8254.19 |
| hypothetical protein | APR52_42670 | Not Available | Negative | 9268382 - 9268972 | 21921.7 |
| poly-beta-1,6 n-acetyl-d-glucosamine synthase | APR52_42675 | P75905 | Negative | 9268965 - 9270272 | 50019.2 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | APR52_42680 | P75906 | Negative | 9270269 - 9272368 | 76614.9 |
| hypothetical protein | APR52_42685 | Not Available | Negative | 9272389 - 9274584 | 82083.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
