Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate transporter subunit | APR52_42485 | P02906 | Negative | 9232292 - 9233335 | 37703.9 |
| iron transporter | APR52_42490 | C5CNX5 | Positive | 9233479 - 9233751 | 10253.3 |
| fad-dependent cmnm(5)s(2)u34 oxidoreductase | APR52_42495 | A9C3G2 | Positive | 9233771 - 9235633 | 66365.9 |
| antibiotic biosynthesis monooxygenase | APR52_42500 | Not Available | Negative | 9235640 - 9235969 | 12202.3 |
| transglutaminase | APR52_42505 | Not Available | Positive | 9236071 - 9236973 | 33227.2 |
| transcriptional regulator | APR52_42510 | Not Available | Negative | 9237535 - 9238005 | 16678.8 |
| hypothetical protein | APR52_42515 | Not Available | Negative | 9237993 - 9238274 | 10826.0 |
| hypothetical protein | APR52_42525 | Not Available | Negative | 9240329 - 9240556 | 8768.59 |
| hypothetical protein | APR52_42530 | Q52562 | Negative | 9241135 - 9241548 | 15036.2 |
| hypothetical protein | APR52_42535 | Not Available | Negative | 9241545 - 9241841 | 10271.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
