Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_42380 | Not Available | Positive | 9213571 - 9214188 | 21738.6 |
| transporter | APR52_42385 | P56949 | Negative | 9214195 - 9215217 | 34884.9 |
| arac family transcriptional regulator | APR52_42390 | Not Available | Positive | 9215554 - 9216432 | 32167.2 |
| dienelactone hydrolase | APR52_42395 | Not Available | Positive | 9216429 - 9217424 | 34816.8 |
| hypothetical protein | APR52_42405 | I3NID5 | Negative | 9219340 - 9220272 | 34415.0 |
| transcription factor | APR52_42410 | Not Available | Negative | 9220406 - 9220675 | 9954.0 |
| serine acetyltransferase | APR52_42415 | Q59967 | Negative | 9220683 - 9221594 | 32893.3 |
| rhodanese | APR52_42420 | Not Available | Negative | 9221627 - 9222106 | 17109.3 |
| hypothetical protein | APR52_42425 | Not Available | Positive | 9222325 - 9222912 | 21223.4 |
| hypothetical protein | APR52_42430 | Not Available | Positive | 9222939 - 9223286 | 11599.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
