Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleobase:cation symporter | APR52_42330 | O32139 | Negative | 9199918 - 9201258 | 46336.6 |
| laci family transcriptional regulator | APR52_42335 | B4EWM9 | Positive | 9201406 - 9202434 | 35983.5 |
| sorbosone dehydrogenase | APR52_42340 | Q44091 | Negative | 9202441 - 9203811 | 47960.2 |
| ala-trna(pro) hydrolase | APR52_42345 | Not Available | Positive | 9203955 - 9204707 | 26335.5 |
| protein-disulfide reductase | APR52_42350 | Q7VMZ4 | Positive | 9204810 - 9206993 | 75406.1 |
| alkyl hydroperoxide reductase | APR52_42355 | Not Available | Positive | 9207191 - 9207793 | 20906.8 |
| mfs transporter | APR52_42360 | P07661 | Positive | 9207958 - 9209268 | 47097.5 |
| uroporphyrinogen decarboxylase | APR52_42365 | C5CLI6 | Positive | 9209304 - 9210419 | 40012.1 |
| primosomal protein n' | APR52_42370 | P17888 | Positive | 9210929 - 9213010 | 74605.7 |
| hypothetical protein | APR52_42375 | Not Available | Negative | 9213034 - 9213249 | 7876.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
