Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma | APR52_42275 | Not Available | Positive | 9186653 - 9187162 | 19045.3 |
| hypothetical protein | APR52_42280 | Not Available | Positive | 9187159 - 9188175 | 37433.4 |
| tonb-dependent receptor | APR52_42285 | Not Available | Positive | 9188353 - 9190812 | 88705.5 |
| xre family transcriptional regulator | APR52_42295 | Not Available | Negative | 9191785 - 9192306 | 18504.2 |
| lysr family transcriptional regulator | APR52_42300 | Not Available | Negative | 9193324 - 9194241 | 33554.4 |
| nadph:quinone reductase | APR52_42305 | Q6GEP3 | Positive | 9194333 - 9195343 | 35394.8 |
| chloride channel protein | APR52_42310 | Q8RXR2 | Negative | 9195351 - 9197093 | 61237.8 |
| gcn5 family acetyltransferase | APR52_42315 | Q9HX72 | Positive | 9197194 - 9197766 | 21387.4 |
| permease | APR52_42320 | Not Available | Negative | 9197769 - 9198482 | 24222.8 |
| s-adenosylhomocysteine deaminase | APR52_42325 | A3DEQ2 | Negative | 9198479 - 9199879 | 49813.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
