Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_03540 | Not Available | Negative | 767654 - 769180 | 54721.9 |
| 3-oxoacyl-acp reductase | APR52_03545 | Not Available | Negative | 769204 - 769956 | 25473.6 |
| carnitine dehydratase | APR52_03550 | O06543 | Negative | 769991 - 771097 | 39014.1 |
| abc transporter atp-binding protein | APR52_03555 | Not Available | Negative | 771129 - 771920 | 28749.4 |
| branched-chain amino acid abc transporter substrate-binding protein | APR52_03560 | Not Available | Negative | 772024 - 773250 | 43030.9 |
| branched-chain amino acid abc transporter permease | APR52_03565 | Not Available | Negative | 773304 - 774356 | 37551.4 |
| branched-chain amino acid abc transporter permease | APR52_03570 | Not Available | Negative | 774372 - 775256 | 31243.8 |
| acyl-coa synthetase | APR52_03575 | Not Available | Negative | 775256 - 777187 | 71518.1 |
| abc transporter atp-binding protein | APR52_03580 | Not Available | Negative | 777274 - 778083 | 29400.6 |
| acyl-coa dehydrogenase | APR52_03585 | Not Available | Negative | 778070 - 779230 | 42376.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
