Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiolase | APR52_42225 | Not Available | Negative | 9177197 - 9178432 | 42925.5 |
| abc transporter substrate-binding protein | APR52_42230 | Not Available | Negative | 9178575 - 9179576 | 35202.2 |
| hypothetical protein | APR52_42235 | Not Available | Negative | 9179633 - 9180337 | 26916.7 |
| 3-hydroxybutyrate dehydrogenase | APR52_42240 | Not Available | Positive | 9180553 - 9181326 | 27090.6 |
| hypothetical protein | APR52_42245 | Not Available | Positive | 9181424 - 9181834 | 15043.1 |
| hypothetical protein | APR52_42250 | Not Available | Positive | 9181828 - 9182622 | 29019.1 |
| lysr family transcriptional regulator | APR52_42255 | P67664 | Negative | 9182663 - 9183616 | 35273.0 |
| 6-aminohexanoate hydrolase | APR52_42260 | Not Available | Positive | 9183746 - 9185200 | 50784.4 |
| plasmid stabilization protein | APR52_42265 | Not Available | Negative | 9185615 - 9185911 | 11207.6 |
| copg family transcriptional regulator | APR52_42270 | Not Available | Negative | 9185899 - 9186201 | 11415.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
