Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | APR52_42175 | Not Available | Negative | 9166047 - 9168053 | 72187.3 |
| hypothetical protein | APR52_42180 | Not Available | Positive | 9168290 - 9168841 | 20552.7 |
| glycine cleavage system protein t | APR52_42185 | Q54DD3 | Positive | 9169091 - 9170290 | 42174.0 |
| glycine cleavage system protein h | APR52_42190 | B9JFK6 | Positive | 9170339 - 9170710 | 13001.2 |
| transcriptional regulator | APR52_42195 | Not Available | Positive | 9171529 - 9172140 | 22175.2 |
| hypothetical protein | APR52_42200 | Not Available | Positive | 9172137 - 9172982 | 31496.8 |
| hypothetical protein | APR52_42205 | Q0A9G6 | Negative | 9173404 - 9173907 | 17970.3 |
| 3-oxoacyl-acp reductase | APR52_42210 | Not Available | Negative | 9173961 - 9174782 | 28320.9 |
| 3-hydroxy-2-methylbutyryl-coa dehydrogenase | APR52_42215 | O02691 | Negative | 9174779 - 9175561 | 27286.9 |
| atp-dependent acyl-coa ligase | APR52_42220 | Not Available | Negative | 9175558 - 9177192 | 58624.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
