Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent epimerase | APR52_42125 | Not Available | Positive | 9155182 - 9156201 | 35645.7 |
| c4-dicarboxylate abc transporter substrate-binding protein | APR52_42130 | A1WPV4 | Positive | 9156266 - 9157237 | 35201.5 |
| c4-dicarboxylate abc transporter | APR52_42135 | Not Available | Positive | 9157361 - 9157855 | 18510.3 |
| c4-dicarboxylate abc transporter permease | APR52_42140 | Not Available | Positive | 9157852 - 9159129 | 45123.3 |
| arac family transcriptional regulator | APR52_42145 | Not Available | Negative | 9159140 - 9159955 | 29322.8 |
| mfs transporter | APR52_42150 | P52067 | Positive | 9160096 - 9161289 | 40313.0 |
| hypothetical protein | APR52_42155 | Not Available | Positive | 9161474 - 9161956 | 16286.2 |
| hypothetical protein | APR52_42160 | Q01674 | Negative | 9161973 - 9164351 | 86514.7 |
| hypothetical protein | APR52_42165 | Not Available | Negative | 9164354 - 9165358 | 35413.1 |
| rna polymerase subunit sigma | APR52_42170 | P23484 | Negative | 9165355 - 9165855 | 18446.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
