Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_42075 | A2VD82 | Negative | 9141177 - 9142553 | 49913.4 |
| 4-oxalocrotonate tautomerase | APR52_42080 | Not Available | Negative | 9142598 - 9142996 | 14405.2 |
| lysr family transcriptional regulator | APR52_42085 | Q47005 | Positive | 9143108 - 9143971 | 30654.4 |
| abc transporter substrate-binding protein | APR52_42090 | P23847 | Negative | 9144052 - 9145539 | 53387.9 |
| abc transporter substrate-binding protein | APR52_42095 | Not Available | Negative | 9145770 - 9147266 | 54704.3 |
| peptide abc transporter atp-binding protein | APR52_42100 | Not Available | Negative | 9147388 - 9148194 | 29307.5 |
| 5-oxoprolinase | APR52_42105 | Q8K010 | Negative | 9148211 - 9151842 | 128799.0 |
| mfs transporter | APR52_42110 | O51798 | Negative | 9151888 - 9153120 | 43852.5 |
| hypothetical protein | APR52_42115 | Q7VXB5 | Negative | 9153286 - 9154101 | 28817.7 |
| lysr family transcriptional regulator | APR52_42120 | Not Available | Negative | 9154190 - 9155095 | 33155.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
