Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| allophanate hydrolase | APR52_42025 | P75745 | Positive | 9131583 - 9132605 | 35443.5 |
| hypothetical protein | APR52_42030 | Q63YD1 | Positive | 9132649 - 9133386 | 26082.1 |
| lysr family transcriptional regulator | APR52_42035 | O34685 | Negative | 9133408 - 9134352 | 34571.1 |
| hypothetical protein | APR52_42040 | Q9I783 | Positive | 9134795 - 9136276 | 52587.5 |
| hypothetical protein | APR52_42045 | Not Available | Positive | 9136295 - 9136558 | 9282.21 |
| pyrrolidone-carboxylate peptidase | APR52_42050 | B2AG45 | Positive | 9136617 - 9137291 | 23730.6 |
| alpha/beta hydrolase | APR52_42055 | Q5NZF6 | Negative | 9137301 - 9138047 | 26647.7 |
| hypothetical protein | APR52_42060 | Not Available | Positive | 9138135 - 9138743 | 20911.6 |
| phosphoglycerate kinase | APR52_42065 | Not Available | Positive | 9138788 - 9139486 | 25952.7 |
| amidohydrolase | APR52_42070 | Not Available | Negative | 9139493 - 9141082 | 56613.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
