Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylhydantoinase | APR52_41970 | Not Available | Negative | 9120244 - 9122376 | 75789.1 |
| hydantoin utilization protein b | APR52_41975 | Q75WB5 | Negative | 9122373 - 9124040 | 58718.8 |
| nickel responsive regulator | APR52_41980 | B8JBW0 | Positive | 9124188 - 9124658 | 17377.5 |
| peptidase m16 | APR52_41990 | P55679 | Positive | 9125200 - 9126642 | 52094.0 |
| zinc protease | APR52_41995 | P55680 | Positive | 9126675 - 9128060 | 49126.6 |
| lysr family transcriptional regulator | APR52_42000 | P67666 | Negative | 9128068 - 9128970 | 32029.6 |
| amino acid transporter | APR52_42005 | P64904 | Positive | 9129046 - 9129681 | 21778.1 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | APR52_42010 | P0ADY0 | Positive | 9129710 - 9130366 | 22804.3 |
| phosphopantetheine adenylyltransferase | APR52_42015 | B9MF03 | Positive | 9130411 - 9130914 | 18539.4 |
| allophanate hydrolase | APR52_42020 | P0AAV5 | Positive | 9130924 - 9131586 | 22962.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
